FEDGEN HPC User Guide
0.1.0

WELCOME

  • About FEDerated GENeral “Omics” (FEDGEN)
  • Get Help

FEDGEN HPC RESOURCES

  • FEDGEN HPC Layout
  • Cluster Resources
  • Cluster Storage

GETTING STARTED

  • Obtaining a FEDGEN HPC account
  • Connect to the Cluster
  • Working With An SSH Client
  • Introduction to MobaXterm
  • Linux command line Basics
  • Making your files safe
  • Transferring files to and from the Cluster

SCHEDULING JOBS

  • Resource Manager
  • SLURM Workload Manager
  • Scheduling Jobs
  • Job Script Examples
  • Managing & Monitoring jobs
  • Going parallel

APPLICATIONS

  • Using Pre-installed Applications
  • Miniconda on FEDGEN HPC
  • JupyterLab
FEDGEN HPC User Guide
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